BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019A04SP1|AL427412
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1759 1793 0.0
>3x_Contig1759
Length = 25622
Score = 1793 bits (903), Expect = 0.0
Identities = 905/907 (99%)
Strand = Plus / Plus
Query: 1 acgatagtttctggaggtgaacaagtaataagagataaatccgtagatctcagggatagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12569 acgatagtttctggaggtgaacaagtaataagagataaatccgtagatctcagggatagg 12628
Query: 61 ttagggcggaattcctggtataacgattggggagaagacctatccgatttcggagtagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12629 ttagggcggaattcctggtataacgattggggagaagacctatccgatttcggagtagat 12688
Query: 121 actgaacttgaatagggtaatattactactatataactgcattatataacatgaatttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12689 actgaacttgaatagggtaatattactactatataactgcattatataacatgaatttgt 12748
Query: 181 ttattttacaatcgtgtatgcaaaaactacacagctttttcaggaacatcttccttagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12749 ttattttacaatcgtgtatgcaaaaactacacagctttttcaggaacatcttccttagag 12808
Query: 241 attggttcgtttggttcttcaatttttgcagtaattgtcagtgtttggtcaatttctaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12809 attggttcgtttggttcttcaatttttgcagtaattgtcagtgtttggtcaatttctaat 12868
Query: 301 ttaccttgttccttcaaaattttcattttggactctgcgcgtccaattatctcagtgctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12869 ttaccttgttccttcaaaattttcattttggactctgcgcgtccaattatctcagtgctc 12928
Query: 361 aagtttttcttccaacccttagaactattcaagaatttatccatttttgatgccggttga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12929 aagtttttcttccaacccttagaactattcaagaatttatccatttttgatgccggttga 12988
Query: 421 gtgctttgggagcttgggaacttattaacagattttctggtgaacacatcagttgaacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12989 gtgctttgggagcttgggaacttattaacagattttctggtgaacacatcagttgaacca 13048
Query: 481 cattcgaaagttagttcataagtttctgggtgtatgttaactttgagcttggattgagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13049 cattcgaaagttagttcataagtttctgggtgtatgttaactttgagcttggattgagag 13108
Query: 541 accccttctggtgagaacttgtcattctgttcctcatcatcaagatattccgcttctttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13109 accccttctggtgagaacttgtcattctgttcctcatcatcaagatattccgcttctttt 13168
Query: 601 tcgatgattttcccaaggaagggttggctgatatcttcctgtgttatcccttcggtagga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13169 tcgatgattttcccaaggaagggttggctgatatcttcctgtgttatcccttcggtagga 13228
Query: 661 tgagacaatgaataagacgtgacatagtaatcccatttttctttcatgttttgaggctct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13229 tgagacaatgaataagacgtgacatagtaatcccatttttctttcatgttttgaggctct 13288
Query: 721 tttaatgtcaaatcgtccacggcaacgtattggattgatacatgtgagcygtcggtattg 780
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 13289 tttaatgtcaaatcgtccacggcaacgtattggattgatacatgtgagctgtcggtattg 13348
Query: 781 tattcaatacggaacatattctcagattctcccatggtgttcctgaccttcaatctatac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13349 tattcaatacggaacatattctcagattctcccatggtgttcctgaccttcaatctatac 13408
Query: 841 aaaatctgatcctttgcagtggtatccctttttagtctgtcttgttcaaacaaaaccatc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13409 aaaatctgatcctttgcagtggtatccctttttagtctgtcttgttcaaacaaaaccatc 13468
Query: 901 mccatgg 907
||||||
Sbjct: 13469 accatgg 13475
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7378
Number of Sequences: 1807
Number of extensions: 7378
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)